If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ), 'gf_id' => 'HOM05D000513', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000513' ), 'data_identifier' => 'HOM05D000513', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000513', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1048', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A05p24500' => 'bna', 'A05p44780' => 'bna', 'A06p32560' => 'bna', 'A06p32570' => 'bna', 'A06p35090' => 'bna', 'A08p13610' => 'bna', 'A08p33270' => 'bna', 'Aa31LG11G3530' => 'aar', 'Aa31LG1G16370' => 'aar', 'Aa31LG1G3050' => 'aar', 'Aa31LG5G12440' => 'aar', 'Aa31LG6G7500' => 'aar', 'Aa31LG6G930' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_340.223' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4941' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.898' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.556' => 'aag', 'Actinidia02548' => 'ach', 'Actinidia05513' => 'ach', 'Actinidia08653' => 'ach', 'Actinidia11936' => 'ach', 'Actinidia16732' => 'ach', 'Actinidia19507' => 'ach', 'Actinidia26911' => 'ach', 'Actinidia26912' => 'ach', 'Actinidia34225' => 'ach', 'Actinidia38766' => 'ach', 'Actinidia38784' => 'ach', 'Ah.02g116030' => 'amhyb', 'Ah.04g154810' => 'amhyb', 'Ah.07g204760' => 'amhyb', 'Ah.07g205560' => 'amhyb', 'Ah.10g031590' => 'amhyb', 'Ah.11g043540' => 'amhyb', 'Ah.12g053350' => 'amhyb', 'Ah.12g059870' => 'amhyb', 'Ah.13g070350' => 'amhyb', 'Ah.14g086610' => 'amhyb', 'Ah.14g088010' => 'amhyb', 'AL1G22860' => 'aly', 'AL1G47180' => 'aly', 'AL3G11070' => 'aly', 'AL5G11880' => 'aly', 'AL6G35740' => 'aly', 'AL7G36170' => 'aly', 'AL8G43340' => 'aly', 'Aqoxy1G01622' => 'aox', 'Aqoxy1G01623' => 'aox', 'Aqoxy1G01800' => 'aox', 'Aqoxy1G02137' => 'aox', 'Aqoxy3G03405' => 'aox', 'Aqoxy3G03408' => 'aox', 'Aqoxy3G03409' => 'aox', 'Aqoxy4G02301' => 'aox', 'Aqoxy4G02302' => 'aox', 'Aqoxy4G02303' => 'aox', 'Aqoxy5G04134' => 'aox', 'Aqoxy5G04266' => 'aox', 'arahy.Tifrunner.gnm1.ann1.27CGVJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3T1LZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XJ09G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JCE23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W32PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZB0KB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83FHR0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G3TAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9I5GT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0PV48' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4P8M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MB9SFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH1SAB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UUZ1A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V3P7C9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VAT0VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VC882V' => 'arhy', 'AT1G11720' => 'ath', 'AT1G32900' => 'ath', 'AT3G01180' => 'ath', 'AT4G18240' => 'ath', 'AT5G24300' => 'ath', 'AT5G65685' => 'ath', 'ATR0135G002' => 'atr', 'ATR0304G017' => 'atr', 'ATR0564G338' => 'atr', 'ATR0602G132' => 'atr', 'ATR0626G157' => 'atr', 'ATR0767G255' => 'atr', 'ATR0794G058' => 'atr', 'Atru.chr10.1352' => 'acertr', 'Atru.chr10.2232' => 'acertr', 'Atru.chr12.2222' => 'acertr', 'Atru.chr3.1124' => 'acertr', 'Atru.chr3.1133' => 'acertr', 'Atru.chr5.765' => 'acertr', 'Atru.chr7.995' => 'acertr', 'Atru.chr8.178' => 'acertr', 'Atru.chr9.1862' => 'acertr', 'AUR62006009' => 'cqu', 'AUR62006085' => 'cqu', 'AUR62007078' => 'cqu', 'AUR62012712' => 'cqu', 'AUR62019409' => 'cqu', 'AUR62019941' => 'cqu', 'AUR62020744' => 'cqu', 'AUR62021943' => 'cqu', 'AUR62027969' => 'cqu', 'AUR62030255' => 'cqu', 'AUR62034405' => 'cqu', 'AUR62035617' => 'cqu', 'AUR62036526' => 'cqu', 'AUR62039808' => 'cqu', 'AUR62042834' => 'cqu', 'AUR62044272' => 'cqu', 'BcaB02g08602' => 'bca', 'BcaB03g13709' => 'bca', 'BcaB04g18467' => 'bca', 'BcaC01g02815' => 'bca', 'BcaC01g02842' => 'bca', 'BcaC05g25041' => 'bca', 'BcaC05g26070' => 'bca', 'BcaC05g27819' => 'bca', 'BcaC05g30392' => 'bca', 'BcaC05g30487' => 'bca', 'BcaC07g38128' => 'bca', 'BcaC07g38687' => 'bca', 'BcaC09g47673' => 'bca', 'BcaNung01221' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00030' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00120' => 'bna', 'BolC1t05933H' => 'bol', 'BolC3t18261H' => 'bol', 'BolC3t18262H' => 'bol', 'BolC5t30749H' => 'bol', 'BolC5t30752H' => 'bol', 'BolC5t32546H' => 'bol', 'BolC5t32547H' => 'bol', 'BolC5t35123H' => 'bol', 'BolC7t44873H' => 'bol', 'BolC8t48555H' => 'bol', 'BolC8t49121H' => 'bol', 'BraA01t04641Z' => 'bra', 'BraA05t21339Z' => 'bra', 'BraA05t23179Z' => 'bra', 'BraA06t24027Z' => 'bra', 'BraA06t26185Z' => 'bra', 'BraA06t26430Z' => 'bra', 'BraA08t33347Z' => 'bra', 'BraA08t35246Z' => 'bra', 'C03p59970' => 'bna', 'C03p59980' => 'bna', 'C05p20520' => 'bna', 'C05p20540' => 'bna', 'C05p38190' => 'bna', 'C07p43470' => 'bna', 'C08p14860' => 'bna', 'C08p14920' => 'bna', 'C09p75370' => 'bna', 'CAN.G1061.14' => 'can', 'CAN.G206.155' => 'can', 'CAN.G257.22' => 'can', 'CAN.G481.17' => 'can', 'CAN.G567.105' => 'can', 'CAN.G569.6' => 'can', 'CAN.G57.22' => 'can', 'CANSAT01G1148' => 'cansat', 'CANSAT21G0008' => 'cansat', 'CANSAT21G1638' => 'cansat', 'CANSAT35G1298' => 'cansat', 'CANSAT56G0796' => 'cansat', 'CANSAT64G2318' => 'cansat', 'CANSAT78G1563' => 'cansat', 'CANSAT80G1561' => 'cansat', 'CARHR012030' => 'chi', 'CARHR032230' => 'chi', 'CARHR075860' => 'chi', 'CARHR189200' => 'chi', 'CARHR224990' => 'chi', 'CARHR279670' => 'chi', 'Carub.0001s1136' => 'cru', 'Carub.0001s3120' => 'cru', 'Carub.0003s0097' => 'cru', 'Carub.0006s2207' => 'cru', 'Carub.0007s2309' => 'cru', 'Carub.0008s2658' => 'cru', 'Ca_00662_v3' => 'car', 'Ca_02910_v3' => 'car', 'Ca_04285_v3' => 'car', 'Ca_06074_v3' => 'car', 'Ca_09940_v3' => 'car', 'Ca_09956_v3' => 'car', 'Ca_12463_v3' => 'car', 'Ca_16711_v3' => 'car', 'Ca_26064_v3' => 'car', 'Ca_29846_v3' => 'car', 'CBR_g23365' => 'cbr', 'CBR_g36217' => 'cbr', 'CBR_g36223' => 'cbr', 'CBR_g36234' => 'cbr', 'CBR_g36241' => 'cbr', 'CBR_g50265' => 'cbr', 'CBR_g50668' => 'cbr', 'CBR_g50672' => 'cbr', 'CBR_g50673' => 'cbr', 'CBR_g50674' => 'cbr', 'CBR_g50677' => 'cbr', 'CBR_g50679' => 'cbr', 'CBR_g50684' => 'cbr', 'CBR_g51672' => 'cbr', 'CBR_g51673' => 'cbr', 'CBR_g53508' => 'cbr', 'CBR_g54339' => 'cbr', 'CBR_g60253' => 'cbr', 'CBR_g69054' => 'cbr', 'CBR_g74072' => 'cbr', 'CBR_g75690' => 'cbr', 'CBR_g75931' => 'cbr', 'CBR_g84048' => 'cbr', 'CBR_g950' => 'cbr', 'Cc02_g01480' => 'ccan', 'Cc06_g23740' => 'ccan', 'Cc07_g03430' => 'ccan', 'Cc07_g07700' => 'ccan', 'Cc07_g07710' => 'ccan', 'Cc08_g16970' => 'ccan', 'Cc09_g01640' => 'ccan', 'Cc09_g09040' => 'ccan', 'CDE02G2485' => 'cde', 'CDE02G4400' => 'cde', 'CDE04G1630' => 'cde', 'CDE04G2299' => 'cde', 'CDE05G0345' => 'cde', 'CDE05G3334' => 'cde', 'CDE05G3649' => 'cde', 'CDE06G1650' => 'cde', 'CDE07G0637' => 'cde', 'CDE09G0475' => 'cde', 'CDE10G1013' => 'cde', 'CDE11G1030' => 'cde', 'CDE12G0585' => 'cde', 'Cfa000217' => 'cfa', 'Cfa006813' => 'cfa', 'Cfa007563' => 'cfa', 'Cfa007565' => 'cfa', 'Cfa010870' => 'cfa', 'Cfa011899' => 'cfa', 'Cfa012887' => 'cfa', 'Cfa016235' => 'cfa', 'Ciclev10007868m.g' => 'ccl', 'Ciclev10011124m.g' => 'ccl', 'Ciclev10014107m.g' => 'ccl', 'Ciclev10014319m.g' => 'ccl', 'Ciclev10019346m.g' => 'ccl', 'Ciclev10019349m.g' => 'ccl', 'Ciclev10019612m.g' => 'ccl', 'Ciclev10025051m.g' => 'ccl', 'CiPaw.01G082200' => 'cil', 'CiPaw.03G025800' => 'cil', 'CiPaw.04G016900' => 'cil', 'CiPaw.06G045800' => 'cil', 'CiPaw.08G000700' => 'cil', 'CiPaw.09G128900' => 'cil', 'CiPaw.10G071400' => 'cil', 'CiPaw.11G110200' => 'cil', 'CiPaw.12G075900' => 'cil', 'ClCG01G001420' => 'cla', 'ClCG01G024360' => 'cla', 'ClCG03G004710' => 'cla', 'ClCG10G015190' => 'cla', 'COL.COLO4_07500' => 'col', 'COL.COLO4_08442' => 'col', 'COL.COLO4_10828' => 'col', 'COL.COLO4_11664' => 'col', 'COL.COLO4_15571' => 'col', 'COL.COLO4_16770' => 'col', 'COL.COLO4_21509' => 'col', 'COL.COLO4_31779' => 'col', 'Cpa.g.c36490' => 'cpa', 'Cpa.g.sc129.29' => 'cpa', 'Cpa.g.sc129.30' => 'cpa', 'Cpa.g.sc14.92' => 'cpa', 'Cpa.g.sc14.93' => 'cpa', 'Cpa.g.sc152.17' => 'cpa', 'Cpa.g.sc17.97' => 'cpa', 'Cpa.g.sc3.93' => 'cpa', 'Cpa.g.sc37.97' => 'cpa', 'Cre03.g185250' => 'cre', 'Cre04.g215150' => 'cre', 'Cre06.g257050' => 'cre', 'Cre06.g282000' => 'cre', 'Cre12.g521700' => 'cre', 'Cre13.g579566' => 'cre', 'Cre13.g579582' => 'cre', 'Cre13.g579598' => 'cre', 'Cre16.g663850' => 'cre', 'Cre16.g665800' => 'cre', 'Cre17.g721500' => 'cre', 'CsaV3_1G010740' => 'csa', 'CsaV3_3G041330' => 'csa', 'CsaV3_3G041360' => 'csa', 'CsaV3_5G001560' => 'csa', 'CsaV3_6G044620' => 'csa', 'CsaV3_6G051510' => 'csa', 'CSS0000728' => 'camsi', 'CSS0004192' => 'camsi', 'CSS0004941' => 'camsi', 'CSS0005914' => 'camsi', 'CSS0011060' => 'camsi', 'CSS0012278' => 'camsi', 'CSS0016980' => 'camsi', 'CSS0021129' => 'camsi', 'CSS0023626' => 'camsi', 'CSS0024844' => 'camsi', 'CSS0028186' => 'camsi', 'CSS0028922' => 'camsi', 'CSS0031972' => 'camsi', 'CSS0032498' => 'camsi', 'CSS0032826' => 'camsi', 'CSS0035890' => 'camsi', 'CSS0036234' => 'camsi', 'CSS0036692' => 'camsi', 'CSS0036876' => 'camsi', 'CSS0037992' => 'camsi', 'CSS0040001' => 'camsi', 'CSS0041358' => 'camsi', 'CSS0046496' => 'camsi', 'CSS0046806' => 'camsi', 'CSS0048537' => 'camsi', 'DCAR_005562' => 'dca', 'DCAR_008154' => 'dca', 'DCAR_008624' => 'dca', 'DCAR_010597' => 'dca', 'DCAR_020450' => 'dca', 'DCAR_027732' => 'dca', 'DCAR_027953' => 'dca', 'Dinv12895' => 'din', 'Dinv13896' => 'din', 'Dinv20054' => 'din', 'Dinv26491' => 'din', 'Dinv26492' => 'din', 'Dinv26991' => 'din', 'Dinv29216' => 'din', 'Dinv29273' => 'din', 'Dinv32283' => 'din', 'Dinv33768' => 'din', 'Dinv34148' => 'din', 'Duzib068G0934' => 'dzi', 'Duzib084G0007' => 'dzi', 'Duzib084G1375' => 'dzi', 'Duzib106G0381' => 'dzi', 'Duzib106G1194' => 'dzi', 'Duzib138G1238' => 'dzi', 'Duzib147G0116' => 'dzi', 'Duzib147G1357' => 'dzi', 'Duzib187G1959' => 'dzi', 'Duzib205G0047' => 'dzi', 'Duzib235G0182' => 'dzi', 'Duzib235G0488' => 'dzi', 'Duzib264G1115' => 'dzi', 'ECA232G3965' => 'eca', 'ECA232G4228' => 'eca', 'ECA236G0550' => 'eca', 'ECA236G3134' => 'eca', 'ECA238G0428' => 'eca', 'ECA238G0990' => 'eca', 'ECA248G2927' => 'eca', 'EL10Ac2g02984' => 'bvu', 'EL10Ac2g03611' => 'bvu', 'EL10Ac3g05186' => 'bvu', 'EL10Ac3g05274' => 'bvu', 'EL10Ac5g11686' => 'bvu', 'EL10Ac5g12400' => 'bvu', 'EL10Ac8g19763' => 'bvu', 'EL10Ac8g20060' => 'bvu', 'Eucgr.C02159' => 'egr', 'Eucgr.D00323' => 'egr', 'Eucgr.D01324' => 'egr', 'Eucgr.E01068' => 'egr', 'Eucgr.H02402' => 'egr', 'Eucgr.J01349' => 'egr', 'Eucgr.K00387' => 'egr', 'FAN01G1732' => 'fan', 'FAN01G2384' => 'fan', 'FAN02G2319' => 'fan', 'FAN03G0047' => 'fan', 'FAN03G2215' => 'fan', 'FAN04G2947' => 'fan', 'FAN06G1902' => 'fan', 'FAN06G2028' => 'fan', 'FAN06G2436' => 'fan', 'FAN06G4755' => 'fan', 'FAN08G2829' => 'fan', 'FAN09G0920' => 'fan', 'FAN10G1266' => 'fan', 'FAN10G1893' => 'fan', 'FAN10G3042' => 'fan', 'FAN10G4330' => 'fan', 'FAN11G0900' => 'fan', 'FAN12G3115' => 'fan', 'FAN13G1409' => 'fan', 'FAN14G5629' => 'fan', 'FAN16G3189' => 'fan', 'FAN17G2564' => 'fan', 'FAN18G2282' => 'fan', 'FAN21G1465' => 'fan', 'FAN21G2967' => 'fan', 'FAN22G1643' => 'fan', 'FAN23G2932' => 'fan', 'FAN25G0071' => 'fan', 'FAN25G0451' => 'fan', 'FAN26G3353' => 'fan', 'FAN28G1163' => 'fan', 'FvH4_1g18810' => 'fve', 'FvH4_3g02040' => 'fve', 'FvH4_3g06130' => 'fve', 'FvH4_4g00200' => 'fve', 'FvH4_5g10580' => 'fve', 'FvH4_6g48410' => 'fve', 'FvH4_7g17630' => 'fve', 'FvH4_7g31450' => 'fve', 'Glyma.01G019100' => 'gma', 'Glyma.01G096700' => 'gma', 'Glyma.04G235200' => 'gma', 'Glyma.05G127800' => 'gma', 'Glyma.06G129400' => 'gma', 'Glyma.07G049900' => 'gma', 'Glyma.07G260500' => 'gma', 'Glyma.08G082600' => 'gma', 'Glyma.09G203650' => 'gma', 'Glyma.09G203700' => 'gma', 'Glyma.10G172200' => 'gma', 'Glyma.13G062700' => 'gma', 'Glyma.13G204700' => 'gma', 'Glyma.14G143800' => 'gma', 'Glyma.15G108000' => 'gma', 'Glyma.16G018500' => 'gma', 'Glyma.18G260101' => 'gma', 'Glyma.19G022900' => 'gma', 'Glyma.20G218100' => 'gma', 'Gohir.A02G147100' => 'ghi', 'Gohir.A05G170400' => 'ghi', 'Gohir.A05G414900' => 'ghi', 'Gohir.A06G197700' => 'ghi', 'Gohir.A07G205600' => 'ghi', 'Gohir.A08G109200' => 'ghi', 'Gohir.A09G015500' => 'ghi', 'Gohir.A09G184700' => 'ghi', 'Gohir.A09G187900' => 'ghi', 'Gohir.A10G012640' => 'ghi', 'Gohir.A10G038700' => 'ghi', 'Gohir.A12G241600' => 'ghi', 'Gohir.D03G033300' => 'ghi', 'Gohir.D03G085900' => 'ghi', 'Gohir.D04G001300' => 'ghi', 'Gohir.D04G120000' => 'ghi', 'Gohir.D05G173500' => 'ghi', 'Gohir.D05G281800' => 'ghi', 'Gohir.D06G117650' => 'ghi', 'Gohir.D06G205100' => 'ghi', 'Gohir.D07G211700' => 'ghi', 'Gohir.D08G121966' => 'ghi', 'Gohir.D08G122032' => 'ghi', 'Gohir.D09G014100' => 'ghi', 'Gohir.D09G179600' => 'ghi', 'Gohir.D09G182700' => 'ghi', 'Gohir.D10G012300' => 'ghi', 'Gohir.D10G039600' => 'ghi', 'Gohir.D10G144333' => 'ghi', 'Gohir.D12G242900' => 'ghi', 'Gorai.001G239200' => 'gra', 'Gorai.003G034900' => 'gra', 'Gorai.004G128700' => 'gra', 'Gorai.006G016400' => 'gra', 'Gorai.006G201600' => 'gra', 'Gorai.006G205000' => 'gra', 'Gorai.008G260100' => 'gra', 'Gorai.009G178700' => 'gra', 'Gorai.009G348800' => 'gra', 'Gorai.010G135300' => 'gra', 'Gorai.010G148700' => 'gra', 'Gorai.010G239400' => 'gra', 'Gorai.011G013800' => 'gra', 'Gorai.011G041700' => 'gra', 'Gorai.012G002300' => 'gra', 'GSVIVG01003706001' => 'vvi', 'GSVIVG01004632001' => 'vvi', 'GSVIVG01011429001' => 'vvi', 'GSVIVG01012723001' => 'vvi', 'GSVIVG01018618001' => 'vvi', 'GSVIVG01019680001' => 'vvi', 'GSVIVG01021404001' => 'vvi', 'GSVIVG01027437001' => 'vvi', 'GSVIVG01028521001' => 'vvi', 'GSVIVG01028682001' => 'vvi', 'GSVIVG01032233001' => 'vvi', 'GSVIVG01038557001' => 'vvi', 'HanXRQChr01g0004221' => 'han', 'HanXRQChr04g0112011' => 'han', 'HanXRQChr04g0117251' => 'han', 'HanXRQChr04g0119781' => 'han', 'HanXRQChr07g0206451' => 'han', 'HanXRQChr09g0265221' => 'han', 'HanXRQChr10g0309461' => 'han', 'HanXRQChr11g0323251' => 'han', 'HanXRQChr12g0377071' => 'han', 'HanXRQChr14g0449751' => 'han', 'HanXRQChr15g0485721' => 'han', 'HanXRQChr17g0554411' => 'han', 'Haze_00206' => 'cav', 'Haze_03946' => 'cav', 'Haze_05537' => 'cav', 'Haze_06803' => 'cav', 'Haze_09199' => 'cav', 'Haze_14520' => 'cav', 'Haze_15732' => 'cav', 'Haze_21252' => 'cav', 'Haze_21253' => 'cav', 'Haze_21254' => 'cav', 'Hma1.2p1_0137F.1_g062340' => 'hma', 'Hma1.2p1_0198F.1_g085240' => 'hma', 'Hma1.2p1_0346F.1_g131540' => 'hma', 'Hma1.2p1_0404F.1_g145310' => 'hma', 'Hma1.2p1_0411F.1_g147060' => 'hma', 'Hma1.2p1_0749F.1_g212600' => 'hma', 'Hma1.2p1_0910F.1_g235830' => 'hma', 'Hma1.2p1_0938F.1_g239235' => 'hma', 'Hma1.2p1_1587F.1_g292310' => 'hma', 'HPP92_003873' => 'vpl', 'HPP92_003893' => 'vpl', 'HPP92_006007' => 'vpl', 'HPP92_006026' => 'vpl', 'HPP92_011145' => 'vpl', 'HPP92_011146' => 'vpl', 'HPP92_011147' => 'vpl', 'HPP92_014632' => 'vpl', 'HPP92_023427' => 'vpl', 'Hund03216' => 'sun', 'Hund11656' => 'sun', 'Hund15597' => 'sun', 'Hund16610' => 'sun', 'Hund21054' => 'sun', 'Hund23468' => 'sun', 'Hund24807' => 'sun', 'Lalb_Chr02g0149541' => 'lal', 'Lalb_Chr02g0159331' => 'lal', 'Lalb_Chr04g0254151' => 'lal', 'Lalb_Chr06g0168591' => 'lal', 'Lalb_Chr08g0240201' => 'lal', 'Lalb_Chr11g0066911' => 'lal', 'Lalb_Chr12g0196081' => 'lal', 'Lalb_Chr12g0196091' => 'lal', 'Lalb_Chr13g0291431' => 'lal', 'Lalb_Chr15g0087621' => 'lal', 'Lalb_Chr17g0343041' => 'lal', 'Lalb_Chr21g0318691' => 'lal', 'Lj1C1018G7' => 'lonja', 'Lj1C1021G9' => 'lonja', 'Lj1C1184T1' => 'lonja', 'Lj1C1231T2' => 'lonja', 'Lj1g0019696' => 'lja', 'Lj1g0022645' => 'lja', 'Lj1g0028208' => 'lja', 'Lj2C152T17' => 'lonja', 'Lj2g0016593' => 'lja', 'Lj2g0019191' => 'lja', 'Lj3g0003963' => 'lja', 'Lj4A110T78' => 'lonja', 'Lj4C174G10' => 'lonja', 'Lj4g0009995' => 'lja', 'Lj4g0014019' => 'lja', 'Lj5A465G13' => 'lonja', 'Lj5g0001445' => 'lja', 'Lj6g0028016' => 'lja', 'Lj9C607T19' => 'lonja', 'Lju50C25T2' => 'lonja', 'Lsat_1_v5_gn_2_73301' => 'lsa', 'Lsat_1_v5_gn_2_88360' => 'lsa', 'Lsat_1_v5_gn_5_81081' => 'lsa', 'Lsat_1_v5_gn_7_34440' => 'lsa', 'Lsat_1_v5_gn_9_49580' => 'lsa', 'Manes.01G055700' => 'mes', 'Manes.01G091700' => 'mes', 'Manes.01G184000' => 'mes', 'Manes.02G001000' => 'mes', 'Manes.02G046733' => 'mes', 'Manes.02G082800' => 'mes', 'Manes.07G073690' => 'mes', 'Manes.07G074704' => 'mes', 'Manes.13G105280' => 'mes', 'Manes.15G118600' => 'mes', 'Manes.16G006900' => 'mes', 'Manes.17G038908' => 'mes', 'Manes.17G038964' => 'mes', 'Mapoly0015s0090' => 'mpo', 'Mapoly0033s0170' => 'mpo', 'Mapoly0055s0049' => 'mpo', 'Mapoly0065s0013' => 'mpo', 'Mapoly0065s0020' => 'mpo', 'Mapoly0100s0048' => 'mpo', 'Mapoly0148s0026' => 'mpo', 'MBI02_g05872_MAGBIO' => 'mbi', 'MBI02_g15396_MAGBIO' => 'mbi', 'MBI04_g22062_MAGBIO' => 'mbi', 'MBI05_g34358_MAGBIO' => 'mbi', 'MBI07_g07819_MAGBIO' => 'mbi', 'MBI07_g07820_MAGBIO' => 'mbi', 'MBI07_g37056_MAGBIO' => 'mbi', 'MBI12_g20131_MAGBIO' => 'mbi', 'MBI14_g15788_MAGBIO' => 'mbi', 'MBI16_g00829_MAGBIO' => 'mbi', 'MBI16_g14672_MAGBIO' => 'mbi', 'MBI19_g28114_MAGBIO' => 'mbi', 'MCO03G143' => 'mco', 'MCO08G155' => 'mco', 'MCO08G308' => 'mco', 'MCO09G471' => 'mco', 'MCO09G523' => 'mco', 'MCO11G850' => 'mco', 'MCO14G300' => 'mco', 'MCO15G226' => 'mco', 'MCO16G357' => 'mco', 'MCO16G430' => 'mco', 'MD00G1130900' => 'mdo', 'MD00G1136700' => 'mdo', 'MD01G1046500' => 'mdo', 'MD01G1218000' => 'mdo', 'MD05G1289400' => 'mdo', 'MD05G1289600' => 'mdo', 'MD05G1346900' => 'mdo', 'MD05G1347400' => 'mdo', 'MD06G1122100' => 'mdo', 'MD07G1159300' => 'mdo', 'MD07G1287700' => 'mdo', 'MD09G1052000' => 'mdo', 'MD10G1265500' => 'mdo', 'MD10G1321600' => 'mdo', 'MD10G1321800' => 'mdo', 'MD13G1285500' => 'mdo', 'MD14G1138500' => 'mdo', 'MD15G1170200' => 'mdo', 'MD16G1281800' => 'mdo', 'Medtr1g078000' => 'mtr', 'Medtr2g023320' => 'mtr', 'Medtr3g091570' => 'mtr', 'Medtr4g094595' => 'mtr', 'Medtr5g030600' => 'mtr', 'Medtr6g012380' => 'mtr', 'Medtr8g024340' => 'mtr', 'MELO3C002455.2' => 'cme', 'MELO3C005795.2' => 'cme', 'MELO3C007155.2' => 'cme', 'MELO3C007685.2' => 'cme', 'MELO3C009861.2' => 'cme', 'Migut.F00206' => 'egut', 'Migut.H00304' => 'egut', 'Migut.H00928' => 'egut', 'Migut.H02246' => 'egut', 'Migut.J00854' => 'egut', 'Migut.M00940' => 'egut', 'Migut.M00941' => 'egut', 'Migut.M01321' => 'egut', 'MSTRG.19407' => 'ama', 'MSTRG.23632' => 'ama', 'MSTRG.24867' => 'ama', 'MSTRG.27023' => 'ama', 'MSTRG.3241' => 'ama', 'MSTRG.7208' => 'ama', 'Nitab4.5_0000093g0200' => 'nta', 'Nitab4.5_0000093g0210' => 'nta', 'Nitab4.5_0000170g0160' => 'nta', 'Nitab4.5_0000396g0260' => 'nta', 'Nitab4.5_0000448g0110' => 'nta', 'Nitab4.5_0000564g0020' => 'nta', 'Nitab4.5_0000807g0080' => 'nta', 'Nitab4.5_0002274g0010' => 'nta', 'Nitab4.5_0002520g0080' => 'nta', 'Nitab4.5_0002827g0060' => 'nta', 'Nitab4.5_0002980g0050' => 'nta', 'Nitab4.5_0003419g0070' => 'nta', 'Nitab4.5_0005074g0060' => 'nta', 'Nitab4.5_0005393g0030' => 'nta', 'Nitab4.5_0007005g0040' => 'nta', 'Nitab4.5_0011941g0020' => 'nta', 'Nitab4.5_0016924g0010' => 'nta', 'Nitab4.5_0019938g0010' => 'nta', 'Nitab4.5_0019938g0020' => 'nta', 'Nn1g00434' => 'nnu', 'Nn1g01041' => 'nnu', 'Nn1g02654' => 'nnu', 'Nn1g03400' => 'nnu', 'Nn1g04753' => 'nnu', 'Nn1g05073' => 'nnu', 'Nn1g05960' => 'nnu', 'Nn1g06156' => 'nnu', 'Nn1g06157' => 'nnu', 'Nn1g06184' => 'nnu', 'Nn1g06414' => 'nnu', 'Nn1g07138' => 'nnu', 'Nn1g09855' => 'nnu', 'Nn2g12360' => 'nnu', 'Nn2g12662' => 'nnu', 'Nn2g12992' => 'nnu', 'Nn2g14189' => 'nnu', 'Nn2g15097' => 'nnu', 'Nn3g17255' => 'nnu', 'Nn3g18870' => 'nnu', 'Nn3g18970' => 'nnu', 'Nn3g20772' => 'nnu', 'Nn3g20850' => 'nnu', 'Nn3g21973' => 'nnu', 'Nn4g22022' => 'nnu', 'Nn4g25513' => 'nnu', 'Nn4g26493' => 'nnu', 'Nn5g27389' => 'nnu', 'Nn5g27400' => 'nnu', 'Nn5g28660' => 'nnu', 'Nn5g29741' => 'nnu', 'Nn7g37187' => 'nnu', 'Nn8g39729' => 'nnu', 'Nn8g40151' => 'nnu', 'Nn8g41189' => 'nnu', 'Nn8g41230' => 'nnu', 'Oeu000959.1' => 'oeu', 'Oeu000960.1' => 'oeu', 'Oeu015751.1' => 'oeu', 'Oeu021506.1' => 'oeu', 'Oeu027853.1' => 'oeu', 'Oeu027855.1' => 'oeu', 'Oeu027856.1' => 'oeu', 'Oeu039526.1' => 'oeu', 'Oeu042856.2' => 'oeu', 'Oeu051208.1' => 'oeu', 'Oeu051893.1' => 'oeu', 'Oeu054738.1' => 'oeu', 'Oeu060989.2' => 'oeu', 'Os01g0720600' => 'osa', 'Os02g0744700' => 'osa', 'Os02g0807100' => 'osa', 'Os04g0624600' => 'osa', 'Os05g0533600' => 'osa', 'Os06g0133000' => 'osa', 'Os06g0160700' => 'osa', 'Os06g0229800' => 'osa', 'Os07g0412100' => 'osa', 'Os08g0191433' => 'osa', 'Os10g0437600' => 'osa', 'Peaxi162Scf00074g00132' => 'pax', 'Peaxi162Scf00129g00129' => 'pax', 'Peaxi162Scf00291g00210' => 'pax', 'Peaxi162Scf00291g00310' => 'pax', 'Peaxi162Scf00474g00313' => 'pax', 'Peaxi162Scf00740g00124' => 'pax', 'Peaxi162Scf00939g00116' => 'pax', 'Peaxi162Scf00939g00117' => 'pax', 'Peaxi162Scf00939g00118' => 'pax', 'Peaxi162Scf01102g00005' => 'pax', 'PGR004G0078' => 'pgr', 'PGR004G2567' => 'pgr', 'PGR031G3590' => 'pgr', 'PGR031G3834' => 'pgr', 'PGR042G1812' => 'pgr', 'PGR044G0413' => 'pgr', 'PGR102G2893' => 'pgr', 'PGR142G0812' => 'pgr', 'PGSC0003DMG400001328' => 'stu', 'PGSC0003DMG400008322' => 'stu', 'PGSC0003DMG400012111' => 'stu', 'PGSC0003DMG400016481' => 'stu', 'PGSC0003DMG400030619' => 'stu', 'PGSC0003DMG401013540' => 'stu', 'PGSC0003DMG401018552' => 'stu', 'PGSC0003DMG402013540' => 'stu', 'PGSC0003DMG402018552' => 'stu', 'Phvul.002G139001' => 'pvu', 'Phvul.002G196600' => 'pvu', 'Phvul.003G078800' => 'pvu', 'Phvul.004G029100' => 'pvu', 'Phvul.006G149680' => 'pvu', 'Phvul.008G036600' => 'pvu', 'Phvul.009G052100' => 'pvu', 'Phvul.010G119300' => 'pvu', 'Potri.001G351800' => 'ptr', 'Potri.001G449500' => 'ptr', 'Potri.004G014100' => 'ptr', 'Potri.007G009600' => 'ptr', 'Potri.011G079450' => 'ptr', 'Potri.011G152200' => 'ptr', 'Potri.015G012400' => 'ptr', 'Potri.017G084100' => 'ptr', 'Potri.018G149500' => 'ptr', 'Pp3c12_3220' => 'ppa', 'Pp3c12_3280' => 'ppa', 'Pp3c14_21270' => 'ppa', 'Pp3c15_14210' => 'ppa', 'Pp3c15_14300' => 'ppa', 'Pp3c18_20850' => 'ppa', 'Pp3c19_7710' => 'ppa', 'Pp3c19_7712' => 'ppa', 'Pp3c1_8710' => 'ppa', 'Pp3c21_3210' => 'ppa', 'Pp3c21_6820' => 'ppa', 'Pp3c21_6821' => 'ppa', 'Pp3c22_6120' => 'ppa', 'Pp3c2_29290' => 'ppa', 'Pp3c7_22420' => 'ppa', 'Pp3c9_14900' => 'ppa', 'Pp3c9_14980' => 'ppa', 'PRCOL_00000831' => 'pco', 'PRCOL_00002119' => 'pco', 'PRCOL_00002606' => 'pco', 'PRCOL_00002796' => 'pco', 'PRCOL_00004329' => 'pco', 'PRCOL_00005712' => 'pco', 'PRCOL_00006347' => 'pco', 'PRCOL_00006594' => 'pco', 'Prupe.2G197400' => 'ppe', 'Prupe.2G309400' => 'ppe', 'Prupe.3G266700' => 'ppe', 'Prupe.4G020100' => 'ppe', 'Prupe.4G076100' => 'ppe', 'Prupe.5G132800' => 'ppe', 'Prupe.6G144700' => 'ppe', 'Prupe.6G211300' => 'ppe', 'Psat0s13g0280' => 'psa', 'Psat0s2039g0040' => 'psa', 'Psat0s335g0080' => 'psa', 'Psat0s3561g0040' => 'psa', 'Psat0s4284g0040' => 'psa', 'Psat1g073520' => 'psa', 'Psat1g180640' => 'psa', 'Psat2g135800' => 'psa', 'Psat4g119520' => 'psa', 'Psat4g119560' => 'psa', 'Psat5g076760' => 'psa', 'Psat5g229520' => 'psa', 'Psat7g092080' => 'psa', 'PSO013G0263' => 'pso', 'PSO063G3834' => 'pso', 'PSO063G4604' => 'pso', 'PSO135G0200' => 'pso', 'PSO170G6101' => 'pso', 'PSO384G1313' => 'pso', 'PSO541G3505' => 'pso', 'PSO541G4629' => 'pso', 'PSO675G1484' => 'pso', 'PSO675G3269' => 'pso', 'PSO675G5345' => 'pso', 'PSO782G4812' => 'pso', 'PSO832G4046' => 'pso', 'QL02p027352' => 'qlo', 'QL02p082359' => 'qlo', 'QL05p059401' => 'qlo', 'QL05p073090' => 'qlo', 'QL06p037723' => 'qlo', 'QL08p047180' => 'qlo', 'QL09p008723' => 'qlo', 'QL11p007112' => 'qlo', 'RcHm_v2.0_Chr1g0361061' => 'rch', 'RcHm_v2.0_Chr1g0380511' => 'rch', 'RcHm_v2.0_Chr2g0109671' => 'rch', 'RcHm_v2.0_Chr2g0168331' => 'rch', 'RcHm_v2.0_Chr4g0384801' => 'rch', 'RcHm_v2.0_Chr5g0002941' => 'rch', 'RcHm_v2.0_Chr5g0013241' => 'rch', 'RcHm_v2.0_Chr7g0187571' => 'rch', 'Rhsim01G0106500' => 'rsi', 'Rhsim02G0253600' => 'rsi', 'Rhsim03G0209200' => 'rsi', 'Rhsim03G0214900' => 'rsi', 'Rhsim08G0070300' => 'rsi', 'Rhsim10G0083900' => 'rsi', 'Rhsim10G0085600' => 'rsi', 'Rhsim13G0153900' => 'rsi', 'Sabra04G0007000' => 'sbr', 'Sabra11G0136800' => 'sbr', 'Sabra11G0148500' => 'sbr', 'Sabra15G0010000' => 'sbr', 'Sabra16G0231300' => 'sbr', 'Sabra16G0303300' => 'sbr', 'Sabra17G0074200' => 'sbr', 'Sabra18G0126300' => 'sbr', 'SalBow1G3534' => 'sbo', 'SalBow1G6141' => 'sbo', 'SalBow3G2525' => 'sbo', 'SalBow4G0675' => 'sbo', 'SalBow6G1032' => 'sbo', 'SalBow6G1468' => 'sbo', 'SalBow8G1130' => 'sbo', 'Sc01g0010840' => 'sci', 'Sc05g0006470' => 'sci', 'Sc10g0003570' => 'sci', 'Sc13g0009900' => 'sci', 'Sc13g0010240' => 'sci', 'Sc16g0000810' => 'sci', 'Sc17g0007400' => 'sci', 'Sed0000131' => 'sed', 'Sed0000175' => 'sed', 'Sed0004653' => 'sed', 'Sed0006328' => 'sed', 'Sed0016815' => 'sed', 'Sed0017521' => 'sed', 'Sed0017553' => 'sed', 'Sed0018484' => 'sed', 'Sed0027566' => 'sed', 'SEGI_05664' => 'sgi', 'SEGI_06341' => 'sgi', 'SEGI_10180' => 'sgi', 'SEGI_13884' => 'sgi', 'SEGI_17123' => 'sgi', 'SEGI_20100' => 'sgi', 'SEGI_21070' => 'sgi', 'SEGI_23545' => 'sgi', 'SEGI_23629' => 'sgi', 'SEGI_31741' => 'sgi', 'SEGI_34408' => 'sgi', 'SEGI_36867' => 'sgi', 'SEGI_37786' => 'sgi', 'SGA_v2.0_scaffold104G30254' => 'sas', 'SGA_v2.0_scaffold121G33106' => 'sas', 'SGA_v2.0_scaffold333G49008' => 'sas', 'SGA_v2.0_scaffold499G52491' => 'sas', 'SGA_v2.0_scaffold4G01913' => 'sas', 'SMO117G0255' => 'smo', 'SMO143G0142' => 'smo', 'SMO234G0040' => 'smo', 'SMO239G0166' => 'smo', 'SMO356G0737' => 'smo', 'SMO358G0424' => 'smo', 'SMO364G0449' => 'smo', 'Solyc01g016660.1' => 'sly', 'Solyc01g056650.1' => 'sly', 'Solyc02g071040.3' => 'sly', 'Solyc02g080570.3' => 'sly', 'Solyc02g088000.3' => 'sly', 'Solyc02g091750.3' => 'sly', 'Solyc02g091760.1' => 'sly', 'Solyc02g091770.3' => 'sly', 'Solyc03g059290.1' => 'sly', 'Solyc03g083090.4' => 'sly', 'Solyc05g025910.3' => 'sly', 'Solyc07g025180.2' => 'sly', 'Solyc07g039260.2' => 'sly', 'Solyc07g042830.4' => 'sly', 'Solyc08g083320.4' => 'sly', 'Solyc10g045450.1' => 'sly', 'Solyc10g046840.1' => 'sly', 'Solyc11g039760.1' => 'sly', 'Sopen02g020100' => 'spe', 'Sopen02g025270' => 'spe', 'Sopen02g032740' => 'spe', 'Sopen02g036350' => 'spe', 'Sopen03g022880' => 'spe', 'Sopen07g022460' => 'spe', 'Sopen08g013170' => 'spe', 'Sopen08g014550' => 'spe', 'Sopen08g031530' => 'spe', 'Sp1g10330' => 'spa', 'Sp1g28110' => 'spa', 'Sp2g23050' => 'spa', 'Sp2g28790' => 'spa', 'Sp3g00920' => 'spa', 'Sp7g15870' => 'spa', 'TAR374G1153' => 'tar', 'TAR374G1602' => 'tar', 'TAR376G0439' => 'tar', 'TAR383G0183' => 'tar', 'TAR622G0870' => 'tar', 'TAR626G1071' => 'tar', 'TAR627G1077' => 'tar', 'TAR629G0438' => 'tar', 'TAR629G1815' => 'tar', 'TAR629G2888' => 'tar', 'THA.LOC104798691' => 'tha', 'THA.LOC104806459' => 'tha', 'THA.LOC104809504' => 'tha', 'THA.LOC104812845' => 'tha', 'THA.LOC104814933' => 'tha', 'THA.LOC104822355' => 'tha', 'Thecc.01G081900' => 'tca', 'Thecc.01G333500' => 'tca', 'Thecc.03G199900' => 'tca', 'Thecc.03G217900' => 'tca', 'Thecc.04G083100' => 'tca', 'Thecc.04G083300' => 'tca', 'Thecc.06G155000' => 'tca', 'Thecc.06G220800' => 'tca', 'Thhalv10003782m.g' => 'esa', 'Thhalv10004081m.g' => 'esa', 'Thhalv10006631m.g' => 'esa', 'Thhalv10007089m.g' => 'esa', 'Thhalv10020091m.g' => 'esa', 'Thhalv10024297m.g' => 'esa', 'TPR.G18371' => 'tpr', 'TPR.G19389' => 'tpr', 'TPR.G19833' => 'tpr', 'TPR.G21618' => 'tpr', 'TPR.G32071' => 'tpr', 'TPR.G348' => 'tpr', 'TPR.G35578' => 'tpr', 'TPR.G4839' => 'tpr', 'TPR.G8813' => 'tpr', 'TPR.G9945' => 'tpr', 'TWI15G0026' => 'twi', 'TWI32G0103' => 'twi', 'TWI38G1833' => 'twi', 'TWI39G0833' => 'twi', 'TWI60G0161' => 'twi', 'TWI63G0257' => 'twi', 'TWI73G1282' => 'twi', 'TWI74G1055' => 'twi', 'unitig_26.g9124' => 'ugi', 'unitig_37.g12107' => 'ugi', 'unitig_748.g7967' => 'ugi', 'vmacro03685' => 'vma', 'vmacro03968' => 'vma', 'vmacro05469' => 'vma', 'vmacro06387' => 'vma', 'vmacro06435' => 'vma', 'vmacro06437' => 'vma', 'vmacro11489' => 'vma', 'vmacro18187' => 'vma', 'vmacro20744' => 'vma', 'vmacro22640' => 'vma', 'VMungo0251G0935' => 'vmu', 'VMungo0331G1196' => 'vmu', 'VMungo0464G2006' => 'vmu', 'VMungo0540G1206' => 'vmu', 'VMungo0720G2216' => 'vmu', 'VMungo1215G0539' => 'vmu', 'VMungo1215G2748' => 'vmu', 'VMungo1215G2870' => 'vmu', 'VMungo1309G0096' => 'vmu', 'VMungo1383G0284' => 'vmu', 'Zm00001eb000080' => 'zma', 'Zm00001eb070230' => 'zma', 'Zm00001eb191890' => 'zma', 'Zm00001eb194550' => 'zma', 'Zm00001eb222830' => 'zma', 'Zm00001eb254490' => 'zma', 'Zm00001eb279740' => 'zma', 'Zm00001eb305810' => 'zma', 'Zm00001eb351550' => 'zma', 'Zm00001eb353810' => 'zma', 'Zm00001eb376100' => 'zma', 'Zm00001eb378140' => 'zma', 'Zm00001eb413290' => 'zma', 'Zm00001eb431240' => 'zma' ) $gf_id = 'HOM05D000513' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000513' ) $data_identifier = 'HOM05D000513' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 6, 'aag' => (int) 6, 'ach' => (int) 11, 'amhyb' => (int) 11, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 17, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 16, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 8, 'can' => (int) 7, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 24, 'ccan' => (int) 8, 'cde' => (int) 13, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 11, 'csa' => (int) 6, 'camsi' => (int) 25, 'dca' => (int) 7, 'din' => (int) 11, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 30, 'gra' => (int) 15, 'vvi' => (int) 12, 'han' => (int) 12, 'cav' => (int) 10, 'hma' => (int) 9, 'vpl' => (int) 9, 'sun' => (int) 7, 'lal' => (int) 12, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 13, 'mpo' => (int) 7, 'mbi' => (int) 12, 'mco' => (int) 10, 'mdo' => (int) 19, 'mtr' => (int) 7, 'cme' => (int) 5, 'egut' => (int) 8, 'ama' => (int) 6, 'nta' => (int) 19, 'nnu' => (int) 36, 'oeu' => (int) 13, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 17, 'pco' => (int) 8, 'ppe' => (int) 8, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 8, 'sbr' => (int) 8, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 13, 'sas' => (int) 5, 'smo' => (int) 7, 'sly' => (int) 18, 'spe' => (int) 9, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 6, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 8, 'ugi' => (int) 3, 'vma' => (int) 10, 'vmu' => (int) 10, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431240' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1